STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D2062.4Uncharacterized protein. (132 aa)    
Predicted Functional Partners:
tbx-34
Putative T-box protein 34.
   
    0.544
C18H7.7
Uncharacterized protein.
   
    0.538
kin-26
Tyrosine-protein kinase.
   
    0.538
C34D4.2
Serine/threonine-protein phosphatase.
   
    0.537
nep-6
NEPrilysin metallopeptidase family.
   
    0.536
F38H4.4
Uncharacterized protein.
   
    0.532
F44D12.8
Uncharacterized protein.
   
    0.528
E03H12.7
Uncharacterized protein.
   
    0.518
F47B3.1
Tyrosine-protein phosphatase.
   
    0.516
dct-9
Major sperm protein; Central component in molecular interactions underlying sperm crawling. Forms an extensive filament system that extends from sperm villipoda, along the leading edge of the pseudopod.
   
    0.515
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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