STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
maco-1Macoilin; Plays a role in the regulation of neuronal activity. (897 aa)    
Predicted Functional Partners:
C15C8.4
Putative low density lipoprotein receptor associated protein (37.4 kD).
   
  
 0.810
nmtn-1
WD_REPEATS_REGION domain-containing protein.
      
 0.807
F09G2.2
Cyclin N-terminal domain-containing protein.
   
  
 0.806
W09G3.7
Uncharacterized protein.
      
 0.806
Y39G10AR.15
Uncharacterized protein.
      
 0.806
C34C12.4
Uncharacterized protein C34C12.4.
      
 0.805
D2092.4
Thioredoxin domain-containing protein.
   
  
 0.699
ttbk-3
Protein kinase domain-containing protein.
      
 0.697
gst-43
Glutathione S-Transferase; Belongs to the GST superfamily.
   
  
 0.670
ric-3
Resistance to inhibitors of cholinesterase protein 3; Required for maturation and cell surface expression of acetylcholine receptors; Belongs to the ric-3 family.
      
 0.621
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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