Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
K04H4.2 | M02G9.1 | K04H4.2c.3 | M02G9.1b.1 | Uncharacterized protein K04H4.2. | Uncharacterized protein. | 0.457 |
K04H4.2 | pqn-13 | K04H4.2c.3 | C14C11.8b.1 | Uncharacterized protein K04H4.2. | Prion-like-(Q/N-rich)-domain-bearing protein. | 0.847 |
K04H4.2 | pqn-26 | K04H4.2c.3 | DY3.5.1 | Uncharacterized protein K04H4.2. | Glutaredoxin domain-containing protein. | 0.531 |
M02G9.1 | K04H4.2 | M02G9.1b.1 | K04H4.2c.3 | Uncharacterized protein. | Uncharacterized protein K04H4.2. | 0.457 |
M02G9.1 | pqn-13 | M02G9.1b.1 | C14C11.8b.1 | Uncharacterized protein. | Prion-like-(Q/N-rich)-domain-bearing protein. | 0.537 |
M02G9.1 | pqn-26 | M02G9.1b.1 | DY3.5.1 | Uncharacterized protein. | Glutaredoxin domain-containing protein. | 0.541 |
Y39B6A.3 | pqn-26 | Y39B6A.3b.1 | DY3.5.1 | Fe-S_biosyn domain-containing protein. | Glutaredoxin domain-containing protein. | 0.544 |
gsr-1 | msra-1 | C46F11.2a.1 | F43E2.5.2 | Glutathione reductase, mitochondrial; Maintains high levels of reduced glutathione in the cytosol. Involved in resistance to oxidative stress and starvation. Together with thioredoxin reductase txtr- 1, required for the reduction of disulfide groups in the cuticle during molting. | PMSR domain-containing protein. | 0.528 |
gsr-1 | pqn-26 | C46F11.2a.1 | DY3.5.1 | Glutathione reductase, mitochondrial; Maintains high levels of reduced glutathione in the cytosol. Involved in resistance to oxidative stress and starvation. Together with thioredoxin reductase txtr- 1, required for the reduction of disulfide groups in the cuticle during molting. | Glutaredoxin domain-containing protein. | 0.560 |
hlh-16 | pqn-26 | DY3.3.1 | DY3.5.1 | BHLH domain-containing protein. | Glutaredoxin domain-containing protein. | 0.851 |
hlh-16 | trt-1 | DY3.3.1 | DY3.4a.2 | BHLH domain-containing protein. | Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme. | 0.499 |
msra-1 | gsr-1 | F43E2.5.2 | C46F11.2a.1 | PMSR domain-containing protein. | Glutathione reductase, mitochondrial; Maintains high levels of reduced glutathione in the cytosol. Involved in resistance to oxidative stress and starvation. Together with thioredoxin reductase txtr- 1, required for the reduction of disulfide groups in the cuticle during molting. | 0.528 |
msra-1 | pqn-26 | F43E2.5.2 | DY3.5.1 | PMSR domain-containing protein. | Glutaredoxin domain-containing protein. | 0.602 |
msra-1 | trxr-1 | F43E2.5.2 | C06G3.7a.1 | PMSR domain-containing protein. | Thioredoxin reductase 1; Together with glutathione reductase gsr-1, required for the reduction of disulfide groups in the cuticle during molting. | 0.558 |
pqn-13 | K04H4.2 | C14C11.8b.1 | K04H4.2c.3 | Prion-like-(Q/N-rich)-domain-bearing protein. | Uncharacterized protein K04H4.2. | 0.847 |
pqn-13 | M02G9.1 | C14C11.8b.1 | M02G9.1b.1 | Prion-like-(Q/N-rich)-domain-bearing protein. | Uncharacterized protein. | 0.537 |
pqn-13 | pqn-26 | C14C11.8b.1 | DY3.5.1 | Prion-like-(Q/N-rich)-domain-bearing protein. | Glutaredoxin domain-containing protein. | 0.547 |
pqn-26 | K04H4.2 | DY3.5.1 | K04H4.2c.3 | Glutaredoxin domain-containing protein. | Uncharacterized protein K04H4.2. | 0.531 |
pqn-26 | M02G9.1 | DY3.5.1 | M02G9.1b.1 | Glutaredoxin domain-containing protein. | Uncharacterized protein. | 0.541 |
pqn-26 | Y39B6A.3 | DY3.5.1 | Y39B6A.3b.1 | Glutaredoxin domain-containing protein. | Fe-S_biosyn domain-containing protein. | 0.544 |
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