STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tctn-1DUF1619 domain-containing protein. (470 aa)    
Predicted Functional Partners:
timm-23
Translocase, Inner Mitochondrial Membrane.
   
 
 0.904
tmem-231
TMEM (Human TransMEMbrane protein) homolog.
   
  
 0.859
K07C11.10
Uncharacterized protein.
   
  
 0.827
F58E6.11
Uncharacterized protein.
   
  
 0.816
Y53G8AM.4
RING-type domain-containing protein.
   
  
 0.814
srw-145
G_PROTEIN_RECEP_F1_2 domain-containing protein.
      
 0.810
F10E9.1
Uncharacterized protein F10E9.1.
      
 0.808
F55A4.3
Uncharacterized protein.
      
 0.808
oac-59
Acyl_transf_3 domain-containing protein.
      
 0.807
cox-5B
Cytochrome OXidase assembly protein.
   
 
 0.802
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.