Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EEED8.10 | F52C6.3 | EEED8.10a.1 | F52C6.3.1 | Putative RNA-binding protein EEED8.10. | Ubiquitin-like domain-containing protein. | 0.610 |
| EEED8.10 | T28F2.2 | EEED8.10a.1 | T28F2.2b.1 | Putative RNA-binding protein EEED8.10. | Uncharacterized protein. | 0.602 |
| EEED8.10 | cul-1 | EEED8.10a.1 | D2045.6.1 | Putative RNA-binding protein EEED8.10. | Cullin-1; Probable core component of multiple cullin-RING-based SCF (SKP1-CUL1-F-box) E3 ubiquitin-protein ligase complexes which mediate the ubiquitination and subsequent proteasomal degradation of target proteins. As a scaffold protein may contribute to catalysis through positioning of the substrate and the ubiquitin-conjugating enzyme. Required for developmentally programmed transitions from the G1 phase of the cell cycle to the G0 phase or the apoptotic pathway. | 0.666 |
| EEED8.10 | cul-3 | EEED8.10a.1 | Y108G3AL.1a.3 | Putative RNA-binding protein EEED8.10. | Cullin-3; Probable core component of multiple cullin-RING-based BCB (BTB-CUL3-BTB) E3 ubiquitin-protein ligase complexes which mediate the ubiquitination and subsequent proteasomal degradation of target proteins. Probably acts as a scaffold protein which may contribute to catalysis through positioning of the substrate and the ubiquitin-conjugating enzyme. Required to target mei-3/katanin for degradation at the meiosis to mitosis transition via its neddylation and deneddylation. Functions in ubiquitin-mediated degradation of CKIs to target cki-1 for degradation. Regulates microtubule st [...] | 0.662 |
| EEED8.10 | hrpu-1 | EEED8.10a.1 | Y41E3.11a.1 | Putative RNA-binding protein EEED8.10. | B30.2/SPRY domain-containing protein. | 0.708 |
| EEED8.10 | ned-8 | EEED8.10a.1 | F45H11.2.1 | Putative RNA-binding protein EEED8.10. | NEDD8; Ubiquitin-like protein which plays an important role in cell cycle control and embryogenesis. Covalent attachment to its substrates requires prior activation by the E1 complex uba-3-ula-1 and linkage to the E2 enzyme ubc-12. Attachment of ned-8 to cullins activates their associated E3 ubiquitin ligase activity, and thus promotes polyubiquitination and proteasomal degradation of cyclins and other regulatory proteins. | 0.620 |
| EEED8.10 | prp-4 | EEED8.10a.1 | C36B1.5.1 | Putative RNA-binding protein EEED8.10. | WD_REPEATS_REGION domain-containing protein. | 0.810 |
| EEED8.10 | rbx-1 | EEED8.10a.1 | ZK287.5.2 | Putative RNA-binding protein EEED8.10. | RING-box protein 1; Component of the SCF (SKP1-CUL1-F-box protein) E3 ubiquitin ligase complex, which mediates the ubiquitination and subsequent proteasomal degradation of target proteins. Through the RING-type zinc finger, seems to recruit the E2 ubiquitination enzyme to the complex and brings it into close proximity to the substrate (By similarity). Essential for meiosis, mitotic chromosomal condensation and cytokinesis. Involved in histone H3 phosphorylation. | 0.612 |
| EEED8.10 | rbx-2 | EEED8.10a.1 | R10A10.2.1 | Putative RNA-binding protein EEED8.10. | RING-type domain-containing protein. | 0.612 |
| EEED8.10 | ubq-1 | EEED8.10a.1 | F25B5.4a.2 | Putative RNA-binding protein EEED8.10. | Ubiquitin-related; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-48-linked is involved in protein degrad [...] | 0.618 |
| F52C6.3 | EEED8.10 | F52C6.3.1 | EEED8.10a.1 | Ubiquitin-like domain-containing protein. | Putative RNA-binding protein EEED8.10. | 0.610 |
| F52C6.3 | T28F2.2 | F52C6.3.1 | T28F2.2b.1 | Ubiquitin-like domain-containing protein. | Uncharacterized protein. | 0.558 |
| F52C6.3 | cul-1 | F52C6.3.1 | D2045.6.1 | Ubiquitin-like domain-containing protein. | Cullin-1; Probable core component of multiple cullin-RING-based SCF (SKP1-CUL1-F-box) E3 ubiquitin-protein ligase complexes which mediate the ubiquitination and subsequent proteasomal degradation of target proteins. As a scaffold protein may contribute to catalysis through positioning of the substrate and the ubiquitin-conjugating enzyme. Required for developmentally programmed transitions from the G1 phase of the cell cycle to the G0 phase or the apoptotic pathway. | 0.689 |
| F52C6.3 | cul-3 | F52C6.3.1 | Y108G3AL.1a.3 | Ubiquitin-like domain-containing protein. | Cullin-3; Probable core component of multiple cullin-RING-based BCB (BTB-CUL3-BTB) E3 ubiquitin-protein ligase complexes which mediate the ubiquitination and subsequent proteasomal degradation of target proteins. Probably acts as a scaffold protein which may contribute to catalysis through positioning of the substrate and the ubiquitin-conjugating enzyme. Required to target mei-3/katanin for degradation at the meiosis to mitosis transition via its neddylation and deneddylation. Functions in ubiquitin-mediated degradation of CKIs to target cki-1 for degradation. Regulates microtubule st [...] | 0.678 |
| F52C6.3 | ned-8 | F52C6.3.1 | F45H11.2.1 | Ubiquitin-like domain-containing protein. | NEDD8; Ubiquitin-like protein which plays an important role in cell cycle control and embryogenesis. Covalent attachment to its substrates requires prior activation by the E1 complex uba-3-ula-1 and linkage to the E2 enzyme ubc-12. Attachment of ned-8 to cullins activates their associated E3 ubiquitin ligase activity, and thus promotes polyubiquitination and proteasomal degradation of cyclins and other regulatory proteins. | 0.734 |
| F52C6.3 | rbx-1 | F52C6.3.1 | ZK287.5.2 | Ubiquitin-like domain-containing protein. | RING-box protein 1; Component of the SCF (SKP1-CUL1-F-box protein) E3 ubiquitin ligase complex, which mediates the ubiquitination and subsequent proteasomal degradation of target proteins. Through the RING-type zinc finger, seems to recruit the E2 ubiquitination enzyme to the complex and brings it into close proximity to the substrate (By similarity). Essential for meiosis, mitotic chromosomal condensation and cytokinesis. Involved in histone H3 phosphorylation. | 0.765 |
| F52C6.3 | rbx-2 | F52C6.3.1 | R10A10.2.1 | Ubiquitin-like domain-containing protein. | RING-type domain-containing protein. | 0.660 |
| F52C6.3 | ubq-1 | F52C6.3.1 | F25B5.4a.2 | Ubiquitin-like domain-containing protein. | Ubiquitin-related; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-48-linked is involved in protein degrad [...] | 0.486 |
| T28F2.2 | EEED8.10 | T28F2.2b.1 | EEED8.10a.1 | Uncharacterized protein. | Putative RNA-binding protein EEED8.10. | 0.602 |
| T28F2.2 | F52C6.3 | T28F2.2b.1 | F52C6.3.1 | Uncharacterized protein. | Ubiquitin-like domain-containing protein. | 0.558 |
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