STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEED8.12Putative RNA-binding protein EEED8.12. (197 aa)    
Predicted Functional Partners:
EEED8.4
Putative RNA-binding protein EEED8.4.
  
   
0.610
acin-1
ACINus (Mammalian Apoptotic Chromatin condensation Inducer in the Nucleus) homolog.
   
 
 0.593
F33D11.10
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 
 0.593
F56A8.8
Uncharacterized protein.
   
    0.592
vet-1
Very Early Transcript.
   
    0.545
vet-6
Very Early Transcript.
   
    0.543
drr-2
RRM domain-containing protein.
  
 
 0.529
Y106G6D.2
Uncharacterized protein.
   
    0.524
C16C10.4
Probable histone deacetylase complex subunit SAP18; Acts in transcription repression. Involved in the tethering of the SIN3 complex to core histone proteins (By similarity). Belongs to the SAP18 family.
   
 
 0.522
F43G6.5
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.
   
 
 0.508
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.