STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEED8.3Uncharacterized protein EEED8.3; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (194 aa)    
Predicted Functional Partners:
C05C10.5
Uncharacterized protein C05C10.5.
   
    0.999
clec-87
C-type lectin domain-containing protein 87.
   
    0.999
gln-6
Gln-synt_C domain-containing protein; Belongs to the glutamine synthetase family.
   
    0.999
C37C3.9
BTB domain-containing protein.
   
    0.999
F18A1.7
CPG4 domain-containing protein.
   
    0.999
gln-5
Gln-synt_C domain-containing protein; Belongs to the glutamine synthetase family.
   
    0.999
pos-1
Cytoplasmic zinc-finger protein.
   
    0.999
puf-5
Pumilio domain-containing protein 5; RNA-binding protein that binds to the consensus sequence 5'- CUCUGUAUCUUGU-3' in mRNA 3'-UTRs and modulates mRNA expression and stability. Functions redundantly with puf-6 and puf-7 in oocyte formation and organization, early embryonic cell divisions, and repression of expression of glp-1 and other maternal mRNAs in late oogenesis.
   
    0.999
clec-88
C-type lectin domain-containing protein 88.
   
    0.999
T01C3.3
RING-type domain-containing protein.
   
    0.999
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.