Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C56C10.9 | F01F1.11 | C56C10.9.1 | F01F1.11.1 | Uncharacterized protein. | Uncharacterized protein. | 0.412 |
F01F1.11 | C56C10.9 | F01F1.11.1 | C56C10.9.1 | Uncharacterized protein. | Uncharacterized protein. | 0.412 |
F01F1.11 | ccch-3 | F01F1.11.1 | W05B10.2.2 | Uncharacterized protein. | C3H1-type domain-containing protein. | 0.512 |
F01F1.11 | pafo-1 | F01F1.11.1 | C55A6.9.1 | Uncharacterized protein. | RNA polymerase II-associated factor 1 homolog; Component of the PAF1 complex which is a multifunctional complex involved in transcription initiation via genetic interactions with TATA-binding proteins, elongation and transcription-coupled histone modification. | 0.422 |
ccch-3 | F01F1.11 | W05B10.2.2 | F01F1.11.1 | C3H1-type domain-containing protein. | Uncharacterized protein. | 0.512 |
ccch-3 | pafo-1 | W05B10.2.2 | C55A6.9.1 | C3H1-type domain-containing protein. | RNA polymerase II-associated factor 1 homolog; Component of the PAF1 complex which is a multifunctional complex involved in transcription initiation via genetic interactions with TATA-binding proteins, elongation and transcription-coupled histone modification. | 0.402 |
pafo-1 | F01F1.11 | C55A6.9.1 | F01F1.11.1 | RNA polymerase II-associated factor 1 homolog; Component of the PAF1 complex which is a multifunctional complex involved in transcription initiation via genetic interactions with TATA-binding proteins, elongation and transcription-coupled histone modification. | Uncharacterized protein. | 0.422 |
pafo-1 | ccch-3 | C55A6.9.1 | W05B10.2.2 | RNA polymerase II-associated factor 1 homolog; Component of the PAF1 complex which is a multifunctional complex involved in transcription initiation via genetic interactions with TATA-binding proteins, elongation and transcription-coupled histone modification. | C3H1-type domain-containing protein. | 0.402 |