Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
daf-1 | daf-14 | F29C4.1a.1 | F01G10.8b.1 | Cell surface receptor daf-1; Controls the dauer/nondauer developmental decision in a range of environmental conditions. Involved in regulating entry into quiescence triggered by satiety. Involved in sensitivity to CO2 levels. | MH2 domain-containing protein. | 0.941 |
daf-1 | daf-3 | F29C4.1a.1 | F25E2.5d.1 | Cell surface receptor daf-1; Controls the dauer/nondauer developmental decision in a range of environmental conditions. Involved in regulating entry into quiescence triggered by satiety. Involved in sensitivity to CO2 levels. | Dwarfin sma. | 0.973 |
daf-1 | daf-4 | F29C4.1a.1 | C05D2.1a.2 | Cell surface receptor daf-1; Controls the dauer/nondauer developmental decision in a range of environmental conditions. Involved in regulating entry into quiescence triggered by satiety. Involved in sensitivity to CO2 levels. | Cell surface receptor daf-4; Involved in TGF-beta pathway. May be a receptor for daf-7. Controls the dauer/nondauer developmental decision in a range of environmental conditions. Regulates body size and male tail patterning. Involved in regulating entry into quiescence triggered by satiety. Involved in sensitivity to CO2 levels. Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. | 0.988 |
daf-1 | daf-5 | F29C4.1a.1 | W01G7.1.1 | Cell surface receptor daf-1; Controls the dauer/nondauer developmental decision in a range of environmental conditions. Involved in regulating entry into quiescence triggered by satiety. Involved in sensitivity to CO2 levels. | C-SKI_SMAD_bind domain-containing protein. | 0.944 |
daf-1 | daf-7 | F29C4.1a.1 | B0412.2.1 | Cell surface receptor daf-1; Controls the dauer/nondauer developmental decision in a range of environmental conditions. Involved in regulating entry into quiescence triggered by satiety. Involved in sensitivity to CO2 levels. | Dauer larva development regulatory growth factor daf-7; May act as a negative regulator of dauer larva development by transducing chemosensory information from ASI neurons. Involved in sensitivity to CO2 levels. | 0.988 |
daf-1 | daf-8 | F29C4.1a.1 | R05D11.1.1 | Cell surface receptor daf-1; Controls the dauer/nondauer developmental decision in a range of environmental conditions. Involved in regulating entry into quiescence triggered by satiety. Involved in sensitivity to CO2 levels. | Dwarfin sma. | 0.971 |
daf-1 | dbl-1 | F29C4.1a.1 | T25F10.2.1 | Cell surface receptor daf-1; Controls the dauer/nondauer developmental decision in a range of environmental conditions. Involved in regulating entry into quiescence triggered by satiety. Involved in sensitivity to CO2 levels. | TGF_BETA_2 domain-containing protein. | 0.983 |
daf-1 | tag-68 | F29C4.1a.1 | F37D6.6.1 | Cell surface receptor daf-1; Controls the dauer/nondauer developmental decision in a range of environmental conditions. Involved in regulating entry into quiescence triggered by satiety. Involved in sensitivity to CO2 levels. | Dwarfin sma. | 0.753 |
daf-1 | tig-2 | F29C4.1a.1 | F39G3.8.1 | Cell surface receptor daf-1; Controls the dauer/nondauer developmental decision in a range of environmental conditions. Involved in regulating entry into quiescence triggered by satiety. Involved in sensitivity to CO2 levels. | TGF_BETA_2 domain-containing protein. | 0.857 |
daf-14 | daf-1 | F01G10.8b.1 | F29C4.1a.1 | MH2 domain-containing protein. | Cell surface receptor daf-1; Controls the dauer/nondauer developmental decision in a range of environmental conditions. Involved in regulating entry into quiescence triggered by satiety. Involved in sensitivity to CO2 levels. | 0.941 |
daf-14 | daf-3 | F01G10.8b.1 | F25E2.5d.1 | MH2 domain-containing protein. | Dwarfin sma. | 0.789 |
daf-14 | daf-4 | F01G10.8b.1 | C05D2.1a.2 | MH2 domain-containing protein. | Cell surface receptor daf-4; Involved in TGF-beta pathway. May be a receptor for daf-7. Controls the dauer/nondauer developmental decision in a range of environmental conditions. Regulates body size and male tail patterning. Involved in regulating entry into quiescence triggered by satiety. Involved in sensitivity to CO2 levels. Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. | 0.967 |
daf-14 | daf-5 | F01G10.8b.1 | W01G7.1.1 | MH2 domain-containing protein. | C-SKI_SMAD_bind domain-containing protein. | 0.939 |
daf-14 | daf-7 | F01G10.8b.1 | B0412.2.1 | MH2 domain-containing protein. | Dauer larva development regulatory growth factor daf-7; May act as a negative regulator of dauer larva development by transducing chemosensory information from ASI neurons. Involved in sensitivity to CO2 levels. | 0.933 |
daf-14 | daf-8 | F01G10.8b.1 | R05D11.1.1 | MH2 domain-containing protein. | Dwarfin sma. | 0.868 |
daf-14 | dbl-1 | F01G10.8b.1 | T25F10.2.1 | MH2 domain-containing protein. | TGF_BETA_2 domain-containing protein. | 0.924 |
daf-14 | sma-6 | F01G10.8b.1 | C32D5.2.1 | MH2 domain-containing protein. | Serine/threonine-protein kinase sma-6; Involved in TGF-beta pathway. May be a receptor for daf-7; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. | 0.898 |
daf-14 | tag-68 | F01G10.8b.1 | F37D6.6.1 | MH2 domain-containing protein. | Dwarfin sma. | 0.841 |
daf-14 | tig-2 | F01G10.8b.1 | F39G3.8.1 | MH2 domain-containing protein. | TGF_BETA_2 domain-containing protein. | 0.857 |
daf-3 | daf-1 | F25E2.5d.1 | F29C4.1a.1 | Dwarfin sma. | Cell surface receptor daf-1; Controls the dauer/nondauer developmental decision in a range of environmental conditions. Involved in regulating entry into quiescence triggered by satiety. Involved in sensitivity to CO2 levels. | 0.973 |
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