STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
far-2Fatty-acid and retinol-binding protein 2; Probably binds lipids; Belongs to the fatty-acid and retinol-binding protein (FARBP) family. (182 aa)    
Predicted Functional Partners:
F02A9.1
Uncharacterized protein F02A9.1.
      
 0.853
F40E10.6
Uncharacterized protein.
      
 0.851
far-8
Fatty Acid/Retinol binding protein.
   
  
 0.778
F54C9.11
Uncharacterized protein.
      
 0.740
ttr-2
Transthyretin-like protein 2.
   
  
 0.700
dct-16
DAF-16/FOXO Controlled, germline Tumor affecting.
   
  
 0.700
C17C3.3
Uncharacterized protein.
      
 0.697
dct-18
DAF-16/FOXO Controlled, germline Tumor affecting.
   
  
 0.670
far-1
Fatty-acid and retinol-binding protein 1; Probably binds lipids; Belongs to the fatty-acid and retinol-binding protein (FARBP) family.
   
 
0.623
ttr-51
TransThyretin-Related family domain.
   
 
 0.581
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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