Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
F02C9.2 | F28D9.4 | F02C9.2.1 | F28D9.4.1 | Uncharacterized protein. | Uncharacterized protein. | 0.436 |
F02C9.2 | Y52B11C.1 | F02C9.2.1 | Y52B11C.1.1 | Uncharacterized protein. | PhosphatidylInositol Glycan anchor biosynthesis class L. | 0.436 |
F02C9.2 | aco-1 | F02C9.2.1 | ZK455.1.2 | Uncharacterized protein. | Probable cytoplasmic aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | 0.693 |
F02C9.2 | aco-2 | F02C9.2.1 | F54H12.1a.1 | Uncharacterized protein. | Probable aconitate hydratase, mitochondrial; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | 0.693 |
F02C9.2 | acsd-1 | F02C9.2.1 | Y71D11A.3b.1 | Uncharacterized protein. | 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; Converts alpha-amino-beta-carboxymuconate-epsilon- semialdehyde (ACMS) to alpha-aminomuconate semialdehyde (AMS). Belongs to the metallo-dependent hydrolases superfamily. ACMSD family. | 0.469 |
F02C9.2 | cts-1 | F02C9.2.1 | T20G5.2.1 | Uncharacterized protein. | Probable citrate synthase, mitochondrial. | 0.476 |
F02C9.2 | icl-1 | F02C9.2.1 | C05E4.9a.2 | Uncharacterized protein. | Bifunctional glyoxylate cycle protein; In the C-terminal section; belongs to the malate synthase family. | 0.450 |
F02C9.2 | ned-8 | F02C9.2.1 | F45H11.2.1 | Uncharacterized protein. | NEDD8; Ubiquitin-like protein which plays an important role in cell cycle control and embryogenesis. Covalent attachment to its substrates requires prior activation by the E1 complex uba-3-ula-1 and linkage to the E2 enzyme ubc-12. Attachment of ned-8 to cullins activates their associated E3 ubiquitin ligase activity, and thus promotes polyubiquitination and proteasomal degradation of cyclins and other regulatory proteins. | 0.535 |
F28D9.4 | F02C9.2 | F28D9.4.1 | F02C9.2.1 | Uncharacterized protein. | Uncharacterized protein. | 0.436 |
Y52B11C.1 | F02C9.2 | Y52B11C.1.1 | F02C9.2.1 | PhosphatidylInositol Glycan anchor biosynthesis class L. | Uncharacterized protein. | 0.436 |
aco-1 | F02C9.2 | ZK455.1.2 | F02C9.2.1 | Probable cytoplasmic aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | Uncharacterized protein. | 0.693 |
aco-1 | aco-2 | ZK455.1.2 | F54H12.1a.1 | Probable cytoplasmic aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | Probable aconitate hydratase, mitochondrial; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | 0.944 |
aco-1 | cts-1 | ZK455.1.2 | T20G5.2.1 | Probable cytoplasmic aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | Probable citrate synthase, mitochondrial. | 0.999 |
aco-1 | icl-1 | ZK455.1.2 | C05E4.9a.2 | Probable cytoplasmic aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | Bifunctional glyoxylate cycle protein; In the C-terminal section; belongs to the malate synthase family. | 0.999 |
aco-1 | ned-8 | ZK455.1.2 | F45H11.2.1 | Probable cytoplasmic aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | NEDD8; Ubiquitin-like protein which plays an important role in cell cycle control and embryogenesis. Covalent attachment to its substrates requires prior activation by the E1 complex uba-3-ula-1 and linkage to the E2 enzyme ubc-12. Attachment of ned-8 to cullins activates their associated E3 ubiquitin ligase activity, and thus promotes polyubiquitination and proteasomal degradation of cyclins and other regulatory proteins. | 0.419 |
aco-2 | F02C9.2 | F54H12.1a.1 | F02C9.2.1 | Probable aconitate hydratase, mitochondrial; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | Uncharacterized protein. | 0.693 |
aco-2 | aco-1 | F54H12.1a.1 | ZK455.1.2 | Probable aconitate hydratase, mitochondrial; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | Probable cytoplasmic aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | 0.944 |
aco-2 | cts-1 | F54H12.1a.1 | T20G5.2.1 | Probable aconitate hydratase, mitochondrial; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | Probable citrate synthase, mitochondrial. | 0.999 |
aco-2 | icl-1 | F54H12.1a.1 | C05E4.9a.2 | Probable aconitate hydratase, mitochondrial; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | Bifunctional glyoxylate cycle protein; In the C-terminal section; belongs to the malate synthase family. | 0.999 |
acsd-1 | F02C9.2 | Y71D11A.3b.1 | F02C9.2.1 | 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; Converts alpha-amino-beta-carboxymuconate-epsilon- semialdehyde (ACMS) to alpha-aminomuconate semialdehyde (AMS). Belongs to the metallo-dependent hydrolases superfamily. ACMSD family. | Uncharacterized protein. | 0.469 |
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