STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ncam-1NCAM (Neural cell adhesion molecule) homolog. (955 aa)    
Predicted Functional Partners:
rig-5
Ig-like domain-containing protein.
   
 0.875
rig-1
NeuRonal IGCAM.
   
  
 0.779
K02C4.3
Probable ubiquitin carboxyl-terminal hydrolase K02C4.3.
   
  
 0.696
wrk-1
Wrapper/Rega-1/Klingon homolog.
   
 
 0.670
byn-1
Uncharacterized protein byn-1; Belongs to the bystin family.
   
  
 0.668
rig-3
Neuronal immunoglobulin domain-containing protein rig-3; Cell surface protein which plays a role in the plasticity of cholinergic synapses at neuromuscular junctions and in the polarity of the mechanosensory neuron ALM, possibly by antagonizing Wnt signaling.
   
 
 0.661
set-29
SET domain-containing protein.
      
 0.621
Y105E8A.1
Glutaredoxin domain-containing protein.
      
 0.618
dnsn-1
Downstream Neighbor of SoN homolog.
      
 0.590
B0024.15
Hexosyltransferase.
      
 0.588
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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