Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C33G3.4 | aman-1 | C33G3.4.1 | F55D10.1.3 | Probable beta-mannosidase; Belongs to the glycosyl hydrolase 2 family. | Alpha-mannosidase. | 0.877 |
C33G3.4 | asm-1 | C33G3.4.1 | B0252.2.2 | Probable beta-mannosidase; Belongs to the glycosyl hydrolase 2 family. | Sphingomyelin phosphodiesterase 1; Converts sphingomyelin to ceramide. Belongs to the acid sphingomyelinase family. | 0.677 |
C33G3.4 | clh-6 | C33G3.4.1 | R07B7.1.1 | Probable beta-mannosidase; Belongs to the glycosyl hydrolase 2 family. | Chloride channel protein. | 0.619 |
C33G3.4 | cln-3.1 | C33G3.4.1 | F07B10.1a.1 | Probable beta-mannosidase; Belongs to the glycosyl hydrolase 2 family. | Battenin. | 0.808 |
C33G3.4 | cln-3.2 | C33G3.4.1 | C01G8.2.1 | Probable beta-mannosidase; Belongs to the glycosyl hydrolase 2 family. | Battenin. | 0.808 |
C33G3.4 | cln-3.3 | C33G3.4.1 | ZC190.1.1 | Probable beta-mannosidase; Belongs to the glycosyl hydrolase 2 family. | Battenin. | 0.808 |
C33G3.4 | cup-15 | C33G3.4.1 | F42A8.3.1 | Probable beta-mannosidase; Belongs to the glycosyl hydrolase 2 family. | Coelomocyte uptake defective protein 15; Modulates the transport of substances from the endosomal to lysosomal compartments. Plays a role in lysosome formation and function in coelomocytes. | 0.702 |
C33G3.4 | ppt-1 | C33G3.4.1 | F44C4.5.1 | Probable beta-mannosidase; Belongs to the glycosyl hydrolase 2 family. | Palmitoyl-protein thioesterase 1; Removes thioester-linked fatty acyl groups such as palmitate from modified cysteine residues in proteins or peptides. | 0.534 |
C33G3.4 | sul-3 | C33G3.4.1 | C54D2.4a.1 | Probable beta-mannosidase; Belongs to the glycosyl hydrolase 2 family. | Sulfatase domain-containing protein. | 0.850 |
Y71G12B.10 | cln-3.1 | Y71G12B.10.1 | F07B10.1a.1 | Pyruvate carboxyltransferase domain-containing protein. | Battenin. | 0.864 |
Y71G12B.10 | cln-3.2 | Y71G12B.10.1 | C01G8.2.1 | Pyruvate carboxyltransferase domain-containing protein. | Battenin. | 0.881 |
Y71G12B.10 | cln-3.3 | Y71G12B.10.1 | ZC190.1.1 | Pyruvate carboxyltransferase domain-containing protein. | Battenin. | 0.555 |
aman-1 | C33G3.4 | F55D10.1.3 | C33G3.4.1 | Alpha-mannosidase. | Probable beta-mannosidase; Belongs to the glycosyl hydrolase 2 family. | 0.877 |
aman-1 | asm-1 | F55D10.1.3 | B0252.2.2 | Alpha-mannosidase. | Sphingomyelin phosphodiesterase 1; Converts sphingomyelin to ceramide. Belongs to the acid sphingomyelinase family. | 0.714 |
aman-1 | clh-6 | F55D10.1.3 | R07B7.1.1 | Alpha-mannosidase. | Chloride channel protein. | 0.690 |
aman-1 | cln-3.1 | F55D10.1.3 | F07B10.1a.1 | Alpha-mannosidase. | Battenin. | 0.912 |
aman-1 | cln-3.2 | F55D10.1.3 | C01G8.2.1 | Alpha-mannosidase. | Battenin. | 0.912 |
aman-1 | cln-3.3 | F55D10.1.3 | ZC190.1.1 | Alpha-mannosidase. | Battenin. | 0.912 |
aman-1 | cup-15 | F55D10.1.3 | F42A8.3.1 | Alpha-mannosidase. | Coelomocyte uptake defective protein 15; Modulates the transport of substances from the endosomal to lysosomal compartments. Plays a role in lysosome formation and function in coelomocytes. | 0.697 |
aman-1 | ppt-1 | F55D10.1.3 | F44C4.5.1 | Alpha-mannosidase. | Palmitoyl-protein thioesterase 1; Removes thioester-linked fatty acyl groups such as palmitate from modified cysteine residues in proteins or peptides. | 0.546 |
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