STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
str-47Seven TM Receptor. (331 aa)    
Predicted Functional Partners:
T09F5.20
Uncharacterized protein.
      
 0.905
T26H5.8
Uncharacterized protein.
      
 0.905
Y47H9C.1
Uncharacterized protein.
      
 0.852
rbm-5
RNA Binding Motif protein homolog.
      
 0.802
pgp-8
p-GlycoProtein related.
      
 0.700
F13E6.2
Uncharacterized protein.
      
 0.691
F56C3.9
BTB domain-containing protein.
      
 0.691
uaf-1
Splicing factor U2AF 65 kDa subunit; Necessary for the splicing of pre-mRNA. Binds to the polypyrimidine tract of introns early during spliceosome assembly (By similarity).
      
 0.666
zipt-2.4
Zrt (ZRT), Irt-(IRT-) like Protein Transporter.
      
 0.614
srt-6
Serpentine Receptor, class T.
   
    0.454
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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