STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
srx-6G_PROTEIN_RECEP_F1_2 domain-containing protein. (308 aa)    
Predicted Functional Partners:
aco-2
Probable aconitate hydratase, mitochondrial; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
  
 
 0.693
aco-1
Probable cytoplasmic aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
  
 
 0.693
fbxb-51
FBA_2 domain-containing protein.
   
    0.592
srr-7
Serpentine Receptor, class R.
   
    0.592
srj-50
Serpentine Receptor, class J.
   
    0.592
srw-20
G_PROTEIN_RECEP_F1_2 domain-containing protein.
   
    0.592
C49D10.7
Uncharacterized protein.
   
    0.585
srw-133
G_PROTEIN_RECEP_F1_2 domain-containing protein.
   
    0.578
srt-5
Serpentine Receptor, class T.
   
    0.576
F44D12.10
C2H2-type domain-containing protein.
   
    0.574
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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