STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F07G6.10Uncharacterized protein. (106 aa)    
Predicted Functional Partners:
Y45F10C.4
UPF0375 protein Y45F10C.4.
   
    0.578
F55B11.2
Uncharacterized protein.
   
    0.512
C35B1.4
Uncharacterized protein.
   
    0.414
D1086.6
Uncharacterized protein.
   
    0.414
F54F7.3
Uncharacterized protein.
   
    0.414
F53H4.2
Uncharacterized protein.
   
    0.408
D1086.7
Uncharacterized protein.
   
    0.406
D1086.11
Uncharacterized protein.
   
    0.402
T12B5.15
Uncharacterized protein.
   
    0.400
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.