STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sdz-10SKN-1 Dependent Zygotic transcript. (340 aa)    
Predicted Functional Partners:
fbxb-62
F-box domain-containing protein.
   
  
 0.935
C08F1.6
Uncharacterized protein.
   
  
 0.808
msp-63
Major sperm protein 63; Central component in molecular interactions underlying sperm crawling. Forms an extensive filament system that extends from sperm villipoda, along the leading edge of the pseudopod.
      
 0.801
msp-33
Major sperm protein 33; Central component in molecular interactions underlying sperm crawling. Forms an extensive filament system that extends from sperm villipoda, along the leading edge of the pseudopod.
      
 0.758
ZK1053.4
Uncharacterized protein.
   
  
 0.737
ZC373.2
Uncharacterized protein.
      
 0.698
col-167
Col_cuticle_N domain-containing protein.
      
 0.664
ule-5
Uterine Lumin Expressed/locailized.
      
 0.660
col-117
Col_cuticle_N domain-containing protein.
      
 0.613
fbxb-43
F-box domain-containing protein.
   
   
0.552
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.