STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
his-43Histone H2A. (127 aa)    
Predicted Functional Partners:
his-32
Histone H3.
 
 
 
 0.953
nap-1
Nucleosome Assembly Protein; Belongs to the nucleosome assembly protein (NAP) family.
   
 
 0.943
his-30
Histone H2A.
  
  
0.915
his-65
Histone H2A.
  
  
0.915
his-3
Histone H2A.
  
  
0.915
his-61
Histone H2A.
  
  
0.913
his-12
Histone H2A.
  
  
0.912
his-19
Histone H2A.
  
  
0.904
his-68
Histone H2A.
  
  
0.886
gly-18
GLYcosylation related.
      
 0.884
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.