STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dhhc-1Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (295 aa)    
Predicted Functional Partners:
dhhc-11
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.951
dhhc-13
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.910
dhhc-8
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.748
ppt-1
Palmitoyl-protein thioesterase 1; Removes thioester-linked fatty acyl groups such as palmitate from modified cysteine residues in proteins or peptides.
      
 0.732
dhhc-6
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
   
 
0.580
rad-23
Uncharacterized protein.
   
 
 0.570
Y54E5A.5
Uncharacterized protein.
      
 0.528
pgk-1
Probable phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
    
 
 0.520
spe-10
Palmitoyltransferase spe-10; Involved in spermatogenesis, specifically in the morphogenesis of fibrous body-membranous organelles (FB-MO), which are Golgi-derived organelles used for transporting sperm-specific components, in spermatocytes and in their localization into budding spermatids. Required for the proper formation of spermatids and spermatozoa.
      
0.474
egal-1
Egalitarian protein homolog; Part of a complex with bicd-1 and dlc-1, which is recruited to the nuclear envelope by unc-83, where in turn, it recruits dynein to the nuclear surface and regulates nuclear migration in hypodermal precursor cells.
      
 0.436
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.