STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F09B9.5SCP domain-containing protein; Belongs to the CRISP family. (184 aa)    
Predicted Functional Partners:
C04C11.1
SCP domain-containing protein.
      
 0.892
scl-8
SCP domain-containing protein; Belongs to the CRISP family.
  
   
 0.849
cap-1
F-actin-capping protein subunit alpha; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
   
  
 0.808
F38B6.4
Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.
    
  0.801
scl-1
SCP domain-containing protein; Belongs to the CRISP family.
  
   
 0.797
scl-11
SCP domain-containing protein; Belongs to the CRISP family.
  
   
 0.795
vap-1
Venom-Allergen-like Protein; Belongs to the CRISP family.
  
   
 0.766
vap-2
Venom-Allergen-like Protein; Belongs to the CRISP family.
      
 0.691
ttr-8
TransThyretin-Related family domain.
      
 0.663
lon-1
Protein lon-1; Regulates body size morphogenesis, but does not affect male tail development; Belongs to the CRISP family.
  
   
 0.606
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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