Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| cosa-1 | him-14 | Y71H2AM.7.1 | ZK1127.11.1 | CrossOver Site Associated. | MutS protein homolog him-14; Required during the pachytene stage of meiotic prophase for the formation of crossovers between homologous chromosomes. Not needed for pairing or synapsis. May promote crossing over by interfering with Holliday junction branch migration. Has no apparent role in DNA mismatch repair. | 0.887 |
| cosa-1 | mlh-1 | Y71H2AM.7.1 | T28A8.7.1 | CrossOver Site Associated. | DNA_mis_repair domain-containing protein. | 0.486 |
| cosa-1 | msh-5 | Y71H2AM.7.1 | F09E8.3a.1 | CrossOver Site Associated. | MutS protein homolog 5; Crucial component in meiotic recombination, functioning at some point after the initiation step of recombination. Plays a role in promoting the crossover outcome of meiotic recombination events. Required for formation of normal meiotic crossover, and crossover and chiasmata generated by artificially made DNA breaks. | 0.944 |
| cosa-1 | mus-81 | Y71H2AM.7.1 | C43E11.2a.1 | CrossOver Site Associated. | ERCC4 domain-containing protein. | 0.707 |
| cosa-1 | rad-51 | Y71H2AM.7.1 | Y43C5A.6a.1 | CrossOver Site Associated. | DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Underwinds duplex DNA. | 0.862 |
| cosa-1 | rmh-1 | Y71H2AM.7.1 | M01E11.3.1 | CrossOver Site Associated. | DUF1767 domain-containing protein. | 0.856 |
| cosa-1 | spo-11 | Y71H2AM.7.1 | T05E11.4a.1 | CrossOver Site Associated. | Meiotic recombination protein spo-11; Required for meiotic recombination. Mediates DNA cleavage that forms the double-strand breaks (DSB) that initiate meiotic recombination. | 0.923 |
| cosa-1 | syp-2 | Y71H2AM.7.1 | C24G6.1.1 | CrossOver Site Associated. | Uncharacterized protein. | 0.885 |
| cosa-1 | zhp-3 | Y71H2AM.7.1 | K02B12.8b.1 | CrossOver Site Associated. | RING-type domain-containing protein. | 0.928 |
| him-14 | cosa-1 | ZK1127.11.1 | Y71H2AM.7.1 | MutS protein homolog him-14; Required during the pachytene stage of meiotic prophase for the formation of crossovers between homologous chromosomes. Not needed for pairing or synapsis. May promote crossing over by interfering with Holliday junction branch migration. Has no apparent role in DNA mismatch repair. | CrossOver Site Associated. | 0.887 |
| him-14 | mlh-1 | ZK1127.11.1 | T28A8.7.1 | MutS protein homolog him-14; Required during the pachytene stage of meiotic prophase for the formation of crossovers between homologous chromosomes. Not needed for pairing or synapsis. May promote crossing over by interfering with Holliday junction branch migration. Has no apparent role in DNA mismatch repair. | DNA_mis_repair domain-containing protein. | 0.991 |
| him-14 | msh-5 | ZK1127.11.1 | F09E8.3a.1 | MutS protein homolog him-14; Required during the pachytene stage of meiotic prophase for the formation of crossovers between homologous chromosomes. Not needed for pairing or synapsis. May promote crossing over by interfering with Holliday junction branch migration. Has no apparent role in DNA mismatch repair. | MutS protein homolog 5; Crucial component in meiotic recombination, functioning at some point after the initiation step of recombination. Plays a role in promoting the crossover outcome of meiotic recombination events. Required for formation of normal meiotic crossover, and crossover and chiasmata generated by artificially made DNA breaks. | 0.999 |
| him-14 | mus-81 | ZK1127.11.1 | C43E11.2a.1 | MutS protein homolog him-14; Required during the pachytene stage of meiotic prophase for the formation of crossovers between homologous chromosomes. Not needed for pairing or synapsis. May promote crossing over by interfering with Holliday junction branch migration. Has no apparent role in DNA mismatch repair. | ERCC4 domain-containing protein. | 0.979 |
| him-14 | pms-2 | ZK1127.11.1 | H12C20.2a.1 | MutS protein homolog him-14; Required during the pachytene stage of meiotic prophase for the formation of crossovers between homologous chromosomes. Not needed for pairing or synapsis. May promote crossing over by interfering with Holliday junction branch migration. Has no apparent role in DNA mismatch repair. | PMS (Post Meiotic Segregation) family. | 0.942 |
| him-14 | rad-51 | ZK1127.11.1 | Y43C5A.6a.1 | MutS protein homolog him-14; Required during the pachytene stage of meiotic prophase for the formation of crossovers between homologous chromosomes. Not needed for pairing or synapsis. May promote crossing over by interfering with Holliday junction branch migration. Has no apparent role in DNA mismatch repair. | DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Underwinds duplex DNA. | 0.935 |
| him-14 | rmh-1 | ZK1127.11.1 | M01E11.3.1 | MutS protein homolog him-14; Required during the pachytene stage of meiotic prophase for the formation of crossovers between homologous chromosomes. Not needed for pairing or synapsis. May promote crossing over by interfering with Holliday junction branch migration. Has no apparent role in DNA mismatch repair. | DUF1767 domain-containing protein. | 0.847 |
| him-14 | spo-11 | ZK1127.11.1 | T05E11.4a.1 | MutS protein homolog him-14; Required during the pachytene stage of meiotic prophase for the formation of crossovers between homologous chromosomes. Not needed for pairing or synapsis. May promote crossing over by interfering with Holliday junction branch migration. Has no apparent role in DNA mismatch repair. | Meiotic recombination protein spo-11; Required for meiotic recombination. Mediates DNA cleavage that forms the double-strand breaks (DSB) that initiate meiotic recombination. | 0.991 |
| him-14 | syp-2 | ZK1127.11.1 | C24G6.1.1 | MutS protein homolog him-14; Required during the pachytene stage of meiotic prophase for the formation of crossovers between homologous chromosomes. Not needed for pairing or synapsis. May promote crossing over by interfering with Holliday junction branch migration. Has no apparent role in DNA mismatch repair. | Uncharacterized protein. | 0.844 |
| him-14 | zhp-3 | ZK1127.11.1 | K02B12.8b.1 | MutS protein homolog him-14; Required during the pachytene stage of meiotic prophase for the formation of crossovers between homologous chromosomes. Not needed for pairing or synapsis. May promote crossing over by interfering with Holliday junction branch migration. Has no apparent role in DNA mismatch repair. | RING-type domain-containing protein. | 0.922 |
| mlh-1 | cosa-1 | T28A8.7.1 | Y71H2AM.7.1 | DNA_mis_repair domain-containing protein. | CrossOver Site Associated. | 0.486 |
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