Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| abu-1 | col-77 | AC3.3.1 | M195.1.1 | Activated in Blocked Unfolded protein response. | Col_cuticle_N domain-containing protein. | 0.435 |
| abu-1 | col-91 | AC3.3.1 | F09G8.6.1 | Activated in Blocked Unfolded protein response. | Putative cuticle collagen 91; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment (By similarity). | 0.666 |
| abu-1 | nspb-10 | AC3.3.1 | C01G12.6.1 | Activated in Blocked Unfolded protein response. | Nematode Specific Peptide family, group B. | 0.766 |
| abu-1 | nspe-7 | AC3.3.1 | Y38E10A.15.1 | Activated in Blocked Unfolded protein response. | Nematode Specific Peptide family, group E. | 0.534 |
| col-77 | abu-1 | M195.1.1 | AC3.3.1 | Col_cuticle_N domain-containing protein. | Activated in Blocked Unfolded protein response. | 0.435 |
| col-77 | col-91 | M195.1.1 | F09G8.6.1 | Col_cuticle_N domain-containing protein. | Putative cuticle collagen 91; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment (By similarity). | 0.668 |
| col-77 | nas-38 | M195.1.1 | F57C12.1.1 | Col_cuticle_N domain-containing protein. | Zinc metalloproteinase nas-38; Metalloprotease. | 0.768 |
| col-91 | abu-1 | F09G8.6.1 | AC3.3.1 | Putative cuticle collagen 91; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment (By similarity). | Activated in Blocked Unfolded protein response. | 0.666 |
| col-91 | col-77 | F09G8.6.1 | M195.1.1 | Putative cuticle collagen 91; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment (By similarity). | Col_cuticle_N domain-containing protein. | 0.668 |
| col-91 | nas-1 | F09G8.6.1 | F45G2.1.1 | Putative cuticle collagen 91; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment (By similarity). | Zinc metalloproteinase nas-1; Metalloprotease. | 0.708 |
| col-91 | nas-38 | F09G8.6.1 | F57C12.1.1 | Putative cuticle collagen 91; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment (By similarity). | Zinc metalloproteinase nas-38; Metalloprotease. | 0.709 |
| col-91 | nhr-11 | F09G8.6.1 | ZC410.1a.1 | Putative cuticle collagen 91; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment (By similarity). | Nuclear hormone receptor family member nhr-11; Orphan nuclear receptor. | 0.707 |
| col-91 | nhr-237 | F09G8.6.1 | Y46H3D.6a.1 | Putative cuticle collagen 91; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment (By similarity). | Nuclear Hormone Receptor family. | 0.698 |
| col-91 | nspb-10 | F09G8.6.1 | C01G12.6.1 | Putative cuticle collagen 91; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment (By similarity). | Nematode Specific Peptide family, group B. | 0.736 |
| col-91 | nspe-7 | F09G8.6.1 | Y38E10A.15.1 | Putative cuticle collagen 91; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment (By similarity). | Nematode Specific Peptide family, group E. | 0.698 |
| col-91 | ptr-8 | F09G8.6.1 | F44F4.4.1 | Putative cuticle collagen 91; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment (By similarity). | SSD domain-containing protein. | 0.669 |
| col-91 | ugt-66 | F09G8.6.1 | C23G10.6.1 | Putative cuticle collagen 91; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment (By similarity). | UDP-glucuronosyltransferase; Belongs to the UDP-glycosyltransferase family. | 0.668 |
| nas-1 | col-91 | F45G2.1.1 | F09G8.6.1 | Zinc metalloproteinase nas-1; Metalloprotease. | Putative cuticle collagen 91; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment (By similarity). | 0.708 |
| nas-1 | nas-38 | F45G2.1.1 | F57C12.1.1 | Zinc metalloproteinase nas-1; Metalloprotease. | Zinc metalloproteinase nas-38; Metalloprotease. | 0.503 |
| nas-1 | nhr-11 | F45G2.1.1 | ZC410.1a.1 | Zinc metalloproteinase nas-1; Metalloprotease. | Nuclear hormone receptor family member nhr-11; Orphan nuclear receptor. | 0.802 |
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