STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F10D7.4Uncharacterized protein. (189 aa)    
Predicted Functional Partners:
str-116
Seven TM Receptor.
   
    0.461
nape-2
Lactamase_B domain-containing protein.
   
    0.457
lgc-38
Ligand-Gated ion Channel; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
    0.438
C13A2.6
Glycosyltransferase family 92 protein; Belongs to the glycosyltransferase 92 family.
   
    0.433
D2023.3
C2 domain-containing protein.
   
    0.420
Y69H2.1
Uncharacterized protein.
   
    0.418
C13A2.1
Glycosyltransferase family 92 protein; Belongs to the glycosyltransferase 92 family.
   
    0.412
npax-3
Paired domain-containing protein.
   
    0.412
Y9C9A.1
Uncharacterized protein.
   
    0.412
ggr-1
Glycine receptor subunit beta-type 4; Glycine receptors are ligand-gated chloride channels. Channel opening is triggered by extracellular glycine. Contributes to the generation of inhibitory postsynaptic currents.
   
    0.406
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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