STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F10E9.4Uncharacterized protein F10E9.4. (262 aa)    
Predicted Functional Partners:
F25B5.5
CDK5RAP1-like protein; Potential regulator of CDK5 activity; Belongs to the methylthiotransferase family. MiaB subfamily.
   
  
 0.896
F12F6.7
Probable DNA polymerase delta small subunit; The function of the small subunit is not yet clear; Belongs to the DNA polymerase delta/II small subunit family.
   
  
 0.895
W08A12.2
Uncharacterized protein.
      
 0.892
ZK470.2
Uncharacterized protein.
      
 0.892
mrps-17
28S ribosomal protein S17, mitochondrial; Belongs to the universal ribosomal protein uS17 family.
   
  
 0.860
exos-1
ECR1_N domain-containing protein.
   
  
 0.856
exos-3
KH_dom_type_1 domain-containing protein.
   
  
 0.852
pot-3
POT1PC domain-containing protein.
      
 0.850
rmh-2
DUF1767 domain-containing protein.
   
  
 0.850
exos-2
EXOSome (Multiexonuclease complex) component.
   
  
 0.832
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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