STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
srh-281Serpentine Receptor, class H. (330 aa)    
Predicted Functional Partners:
oac-15
Acyl_transf_3 domain-containing protein.
      
 0.971
C34D4.2
Serine/threonine-protein phosphatase.
      
 0.890
F01D4.5
PHD-type domain-containing protein.
      
 0.853
F11A5.3
Uncharacterized protein.
   
  
 0.814
bgnt-1.1
B3GNT1, Beta-1,3-N-acetylGucosamiNylTransferase 1, homolog.
      
 0.804
lgc-45
Ligand-Gated ion Channel; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
      
 0.693
rap-3
RAP homolog (Vertebrate Rap GTPase family).
      
 0.692
C52B11.5
Uncharacterized protein.
      
 0.584
klp-12
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
      
 0.531
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.