STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F11F1.8DUF148 domain-containing protein. (187 aa)    
Predicted Functional Partners:
npp-11
Nuclear Pore complex Protein.
    
 
 0.537
unc-79
Uncoordinated protein 79.
    
 
 0.512
C40H1.3
Uncharacterized protein C40H1.3.
      
 0.461
F57H12.6
Uncharacterized protein.
   
 
 0.425
utx-1
UTX (Ubiquitously transcribed TPR on X) homolog.
   
 
 0.422
T21F4.1
Uncharacterized protein; Belongs to the arginase family.
    
 
 0.416
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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