STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lgc-51Ligand-Gated ion Channel; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (450 aa)    
Predicted Functional Partners:
lgc-15
Neur_chan_LBD domain-containing protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
    0.684
lgc-7
Ligand-Gated ion Channel; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
    0.650
srw-84
G_PROTEIN_RECEP_F1_2 domain-containing protein.
   
    0.548
C14E2.6
Lipase_3 domain-containing protein.
   
    0.547
Y6B3B.1
Uncharacterized protein.
   
    0.546
srh-148
Serpentine Receptor, class H.
   
    0.538
T04B8.1
Uncharacterized protein.
   
    0.538
Y105E8A.32
Uncharacterized protein.
   
    0.538
F54E4.2
G_PROTEIN_RECEP_F1_2 domain-containing protein.
   
    0.536
W04G5.8
Uncharacterized protein.
   
    0.532
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.