STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F12E12.12Uncharacterized protein. (215 aa)    
Predicted Functional Partners:
pks-1
PolyKetide Synthase.
  
 0.840
Y73F8A.27
2Fe-2S ferredoxin-type domain-containing protein.
  
 0.596
F10G8.9
PKS_KS domain-containing protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.556
maoc-1
MAO-C-like dehydratase domain.
  
 0.553
cyp-13A12
CYtochrome P450 family; Belongs to the cytochrome P450 family.
   
 
 0.516
F37C12.3
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.515
Y56A3A.19
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.515
fasn-1
Carrier domain-containing protein.
  
 0.500
F32H2.6
Ketoacyl_synth_N domain-containing protein.
  
 0.500
R04B5.5
PKS_ER domain-containing protein.
  
 
 0.500
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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