STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sdz-12Zinc finger protein sdz-12; Together with ehn-3, may play a role in gonadogenesis. Belongs to the krueppel C2H2-type zinc-finger protein family. (330 aa)    
Predicted Functional Partners:
C46E10.8
Uncharacterized protein.
   
  
 0.921
K09C8.2
Uncharacterized protein.
      
 0.698
Y57A10B.6
Uncharacterized protein.
   
   0.464
ztf-16
Zinc finger protein ztf-16; Positively regulates the expression of ver-1 in the amphid sheath glia of amphid sensory neurons. Together with ehn-3, plays a role in somatic gonad development and is required for proper gonadal primordium assembly and somatic gonad precursor cell morphology ; Belongs to the Ikaros C2H2-type zinc-finger protein family.
  
 
 
0.436
arg-1
Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.
    
 
 0.418
fkh-6
Fork-head domain-containing protein.
    
 
 0.410
rnf-1
RING-type domain-containing protein.
   
   0.410
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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