STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
col-128COLlagen. (427 aa)    
Predicted Functional Partners:
dpy-9
Col_cuticle_N domain-containing protein.
  
  
0.892
dpy-8
Col_cuticle_N domain-containing protein.
  
  
0.881
col-46
COLlagen.
  
 
0.737
cdh-10
CaDHerin family.
   
 
 0.734
R12E2.14
Uncharacterized protein.
   
  
 0.666
ZK896.1
CUB_2 domain-containing protein.
   
  
 0.662
str-257
Seven TM Receptor.
      
 0.660
oac-5
NRF domain-containing protein.
      
 0.660
F16G10.14
Uncharacterized protein.
      
 0.660
srv-22
G_PROTEIN_RECEP_F1_2 domain-containing protein.
      
 0.660
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.