STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F13B12.4Putative pyridoxal-phosphate dependent protein F13B12.4; Belongs to the cysteine synthase/cystathionine beta- synthase family. Highly divergent. (435 aa)    
Predicted Functional Partners:
F28H1.1
Uncharacterized protein.
      
 0.895
nhx-3
Probable Na(+)/H(+) antiporter nhx-3; Plays a role in epithelial membrane transport processes.
     
 0.892
T01D3.6
Uncharacterized protein.
   
  
 0.853
fil-2
Fasting Induced Lipase.
      
 0.807
lpr-4
LiPocalin-Related protein.
   
  
 0.793
zig-4
Zwei Ig domain protein zig-4; Required for maintaining axon position of PVQ and PVP neurons postembryonically in the ventral nerve cord (VNC) by preventing axons drifting into the opposite side of the VNC that could occur during body growth and movement.
      
 0.740
suox-1
Cytochrome b5 heme-binding domain-containing protein.
  
  
 0.729
cbl-1
Cystathionine Beta Lyase.
  
 0.727
cth-1
CystaTHionine gamma lyase.
  
 0.727
cth-2
Putative cystathionine gamma-lyase 2; Belongs to the trans-sulfuration enzymes family.
  
 0.727
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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