STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F13D11.43Beta_HSD domain-containing protein; Belongs to the 3-beta-HSD family. (343 aa)    
Predicted Functional Partners:
rpl-23
60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
   
 
 0.997
rps-3
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 
 0.997
rps-15
40S ribosomal protein S15; Negatively regulates lifespan.
   
 
 0.997
rps-11
Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family.
   
 
 0.997
rps-1
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 
 0.997
rps-18
Ribosomal Protein, Small subunit; Belongs to the universal ribosomal protein uS13 family.
  
   0.997
rps-9
40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.
   
 
 0.995
rpl-13
60S ribosomal protein L13.
   
   0.994
rpl-18
60S ribosomal protein L18.
   
 
 0.994
rps-30
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
   0.993
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.