STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F13E6.1Uncharacterized protein F13E6.1; Belongs to the TPD52 family. (195 aa)    
Predicted Functional Partners:
F08G12.1
Uncharacterized protein.
   
  
 0.776
Y38H6C.16
Uncharacterized protein.
   
  
 0.760
W08E12.7
Peptidase_M24 domain-containing protein.
      
 0.758
ZK1058.9
Uncharacterized protein.
      
 0.758
ccdc-47
CCDC (Human Coiled Coil Domain Containing) homolog.
      
 0.741
T13C2.6
EGF-like domain-containing protein.
   
  
 0.703
attf-2
AT hook Transcription Factor family.
   
  
 0.702
fust-1
FUS/TLS RNA binding protein homolog.
   
  
 0.699
edc-3
DFDF domain-containing protein.
      
 0.693
H34C03.2
Ubiquitin carboxyl-terminal hydrolase.
      
 0.691
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.