STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F13E6.2Uncharacterized protein. (729 aa)    
Predicted Functional Partners:
F56C3.9
BTB domain-containing protein.
      
 0.891
T26H5.8
Uncharacterized protein.
   
  
 0.891
T09F5.20
Uncharacterized protein.
      
 0.890
utx-1
UTX (Ubiquitously transcribed TPR on X) homolog.
  
 0.871
zipt-2.4
Zrt (ZRT), Irt-(IRT-) like Protein Transporter.
      
 0.850
Y47H9C.1
Uncharacterized protein.
      
 0.818
gcy-11
Receptor-type guanylate cyclase gcy-11; Guanylate cyclase involved in the production of the second messenger cGMP (By similarity).
     
 0.817
Y69A2AR.18
Uncharacterized protein.
   
 
 0.815
atp-3
ATP synthase subunit.
   
 
 0.800
rpl-23
60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
  
 
 0.764
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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