STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F13G3.7Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (373 aa)    
Predicted Functional Partners:
mrpl-47
Mitochondrial Ribosomal Protein, Large.
   
  
 0.809
mrpl-13
Mitochondrial Ribosomal Protein, Large.
 
      0.652
ipgm-1
2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
   
  
 0.558
mrps-5
Putative 28S ribosomal protein S5, mitochondrial; Belongs to the universal ribosomal protein uS5 family.
   
  
 0.473
Y53F4B.23
Uncharacterized protein.
      
 0.418
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
Server load: low (20%) [HD]