STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sdz-14SKN-1 Dependent Zygotic transcript. (242 aa)    
Predicted Functional Partners:
fbxb-41
F-box domain-containing protein.
   
    0.607
dsl-2
Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.
   
    0.601
F56A8.8
Uncharacterized protein.
   
    0.592
fbxb-54
F-box domain-containing protein.
   
    0.592
fbxc-28
F-box C protein.
   
    0.592
fbxb-71
F-box domain-containing protein.
   
    0.591
F14B6.3
Uncharacterized protein.
   
   
0.580
btb-10
BTB domain-containing protein.
   
    0.564
btb-11
BTB domain-containing protein.
   
    0.553
ZK430.5
Peptidase C50 domain-containing protein.
   
    0.552
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.