STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bath-30BTB and MATH domain containing. (314 aa)    
Predicted Functional Partners:
szy-4
Suppressor of ZYg-1.
   
   0.580
npp-11
Nuclear Pore complex Protein.
   
 
 0.544
F52C6.2
Ubiquitin-like domain-containing protein.
   
   0.524
unc-79
Uncoordinated protein 79.
    
 
 0.512
R02F2.4
Uncharacterized protein.
   
   0.483
utx-1
UTX (Ubiquitously transcribed TPR on X) homolog.
   
 
 0.422
set-32
SET domain-containing protein.
   
   0.415
C29A12.1
Uncharacterized protein.
   
    0.404
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.