STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acp-3ACid Phosphatase family; Belongs to the histidine acid phosphatase family. (425 aa)    
Predicted Functional Partners:
pks-1
PolyKetide Synthase.
      
 0.695
C31H1.5
Uncharacterized protein.
   
    0.525
F42A9.7
Major sperm protein; Central component in molecular interactions underlying sperm crawling. Forms an extensive filament system that extends from sperm villipoda, along the leading edge of the pseudopod.
   
    0.478
acs-18
AMP-binding domain-containing protein.
   
    0.468
F20D6.6
SER_THR_PHOSPHATASE domain-containing protein.
   
   0.465
F44G3.7
Uncharacterized protein; Belongs to the serpin family.
   
   0.458
ZC477.2
SER_THR_PHOSPHATASE domain-containing protein.
   
   0.458
C48B6.4
Tyrosine-protein phosphatase domain-containing protein.
   
    0.457
C09H5.7
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
   0.451
C47E12.11
Uncharacterized protein.
   
    0.448
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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