STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
srw-36G_PROTEIN_RECEP_F1_2 domain-containing protein. (297 aa)    
Predicted Functional Partners:
Y62F5A.10
Uncharacterized protein.
   
 
 0.899
srz-103
Serpentine Receptor, class Z.
   
  
 0.893
F52G2.3
RSD-2 domain-containing protein.
      
 0.891
Y39C12A.9
J domain-containing protein.
      
 0.891
F44E5.3
Uncharacterized protein.
      
 0.818
clec-179
C-type LECtin.
    
 
 0.695
dod-17
CUB_2 domain-containing protein.
      
 0.670
dcap-2
mRNA-decapping enzyme 2; RNA-decapping enzyme although it does not bind cap. May contribute to gene regulation in multiple RNA pathways including monomethylguanosine- and trimethylguanosine-capped RNAs. Belongs to the Nudix hydrolase family. DCP2 subfamily.
      
 0.660
dcap-1
mRNA_decap_C domain-containing protein.
      
 0.613
rsd-2
RSD-2 domain-containing protein.
   
 
 0.601
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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