STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cyp-35D1CYtochrome P450 family; Belongs to the cytochrome P450 family. (499 aa)    
Predicted Functional Partners:
nhr-176
Nuclear Hormone Receptor family.
   
 
 0.932
pks-1
PolyKetide Synthase.
  
 0.811
cyp-43A1
CYtochrome P450 family; Belongs to the cytochrome P450 family.
  
 
 0.714
nhr-120
Nuclear Hormone Receptor family.
    
 
 0.705
ugt-25
UDP-glucuronosyltransferase; Belongs to the UDP-glycosyltransferase family.
   
 
 0.675
ugt-37
UDP-GlucuronosylTransferase.
   
 
 0.671
ben-1
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
   
 
 0.609
ugt-13
UDP-GlucuronosylTransferase.
   
 
 0.602
ugt-16
UDP-glucuronosyltransferase; Belongs to the UDP-glycosyltransferase family.
   
 
 0.595
nhr-62
Nuclear hormone receptor family member nhr-62; Orphan nuclear receptor.
    
 
 0.579
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.