STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
best-12Bestrophin homolog 12; Forms chloride channels. (434 aa)    
Predicted Functional Partners:
best-6
Bestrophin-6.
  
 
 
0.642
nkb-2
Na+/K+ ATPase, Beta subunit.
  
    0.585
best-25
Bestrophin homolog 25; Forms chloride channels.
  
 
 
0.565
best-11
Bestrophin homolog; Forms chloride channels; Belongs to the bestrophin family.
  
 
 
0.556
C09B9.85
Bestrophin homolog; Forms chloride channels; Belongs to the bestrophin family.
  
 
 
0.555
best-10
Bestrophin homolog; Forms chloride channels; Belongs to the bestrophin family.
  
 
 
0.544
ZK484.7
Tyrosine-protein phosphatase.
   
    0.538
best-26
Bestrophin homolog 26; Forms chloride channels.
  
 
 
0.526
gln-2
Probable glutamine synthetase.
   
   0.519
R13A1.3
BTB domain-containing protein.
   
    0.512
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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