STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
far-3Fatty Acid/Retinol binding protein. (189 aa)    
Predicted Functional Partners:
far-8
Fatty Acid/Retinol binding protein.
      
 0.850
F08G2.8
Uncharacterized protein.
      
 0.698
far-7
Fatty Acid/Retinol binding protein.
      
 0.692
F22E5.1
Uncharacterized protein.
      
 0.691
C16C8.11
Ubiquitin-like domain-containing protein.
   
 
 0.686
lact-1
Beta-lactamase domain-containing protein.
      
 0.663
metl-2
Methyltransferase-like protein; Belongs to the methyltransferase superfamily. METL family.
   
  
 0.661
rom-2
Inactive rhomboid-related protein 2; Probable inactive serine protease.
      
 0.660
F14H3.5
Uncharacterized protein.
      
 0.660
R07E4.5
Uncharacterized protein.
      
 0.660
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.