STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
far-5Fatty Acid/Retinol binding protein. (176 aa)    
Predicted Functional Partners:
cyp-33D3
CYtochrome P450 family; Belongs to the cytochrome P450 family.
   
 
 0.764
cyp-33C4
CYtochrome P450 family; Belongs to the cytochrome P450 family.
   
 
 0.763
cyp-34A2
CYtochrome P450 family; Belongs to the cytochrome P450 family.
   
 
 0.703
cyp-34A4
Uncharacterized protein; Belongs to the cytochrome P450 family.
   
 
 0.702
cyp-13A12
CYtochrome P450 family; Belongs to the cytochrome P450 family.
   
 
 0.700
far-7
Fatty Acid/Retinol binding protein.
      
 0.693
acs-1
Fatty Acid CoA Synthetase family.
   
 
 0.669
hsp-12.3
SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.
    
 
 0.624
cyp-34A9
CYtochrome P450 family; Belongs to the cytochrome P450 family.
   
 
 0.603
madf-2
MADF domain-containing protein.
    
 
 0.552
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.