Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
athp-1 | btf-1 | C44B9.4.1 | F15D4.1.1 | AT Hook plus PHD finger transcription factor. | BTAF (TBP-associated factor) homolog. | 0.794 |
btf-1 | athp-1 | F15D4.1.1 | C44B9.4.1 | BTAF (TBP-associated factor) homolog. | AT Hook plus PHD finger transcription factor. | 0.794 |
btf-1 | drap-1 | F15D4.1.1 | F40F9.7a.1 | BTAF (TBP-associated factor) homolog. | CBFD_NFYB_HMF domain-containing protein. | 0.949 |
btf-1 | dro-1 | F15D4.1.1 | F53A2.5.1 | BTAF (TBP-associated factor) homolog. | CBFD_NFYB_HMF domain-containing protein. | 0.892 |
btf-1 | isw-1 | F15D4.1.1 | F37A4.8.1 | BTAF (TBP-associated factor) homolog. | Chromatin-remodeling complex ATPase chain isw-1; Energy-transducing component of a NURF-like (nucleosome- remodeling factor-like) complex, which would catalyze ATP-dependent nucleosome sliding and facilitate transcription of chromatin (Probable). Involved in vulval cell fates. Belongs to the SNF2/RAD54 helicase family. ISWI subfamily. | 0.624 |
btf-1 | pqn-85 | F15D4.1.1 | Y43H11AL.3a.1 | BTAF (TBP-associated factor) homolog. | Nipped-B-like protein pqn-85; Probably plays a structural role in chromatin. Involved in sister chromatid cohesion, possibly by interacting with the cohesin complex (By similarity). | 0.649 |
btf-1 | taf-2 | F15D4.1.1 | Y37E11B.4.1 | BTAF (TBP-associated factor) homolog. | Transcription initiation factor TFIID subunit 2; Component of general transcription factor TFIID which establishes the initiation site for mRNA transcription (By similarity). May regulate RNA polymerase II activity and thereby may control transcription initiation by RNA polymerase II. Belongs to the TAF2 family. | 0.782 |
btf-1 | tag-342 | F15D4.1.1 | B0464.8.1 | BTAF (TBP-associated factor) homolog. | Uncharacterized protein. | 0.651 |
btf-1 | tbp-1 | F15D4.1.1 | T20B12.2.1 | BTAF (TBP-associated factor) homolog. | TATA-box-binding protein; General transcription factor that functions at the core of the DNA-binding multiprotein factor TFIID. Binding of TFIID to the TATA box is the initial transcriptional step of the pre-initiation complex (PIC), playing a role in the activation of eukaryotic genes transcribed by RNA polymerase II. | 0.994 |
btf-1 | tlf-1 | F15D4.1.1 | F39H11.2b.1 | BTAF (TBP-associated factor) homolog. | TBP-Like Factor. | 0.920 |
btf-1 | ttb-1 | F15D4.1.1 | W03F9.5.1 | BTAF (TBP-associated factor) homolog. | Transcription initiation factor IIB; General factor that plays a major role in the activation of eukaryotic genes transcribed by RNA polymerase II. | 0.682 |
drap-1 | btf-1 | F40F9.7a.1 | F15D4.1.1 | CBFD_NFYB_HMF domain-containing protein. | BTAF (TBP-associated factor) homolog. | 0.949 |
drap-1 | dro-1 | F40F9.7a.1 | F53A2.5.1 | CBFD_NFYB_HMF domain-containing protein. | CBFD_NFYB_HMF domain-containing protein. | 0.997 |
drap-1 | tbp-1 | F40F9.7a.1 | T20B12.2.1 | CBFD_NFYB_HMF domain-containing protein. | TATA-box-binding protein; General transcription factor that functions at the core of the DNA-binding multiprotein factor TFIID. Binding of TFIID to the TATA box is the initial transcriptional step of the pre-initiation complex (PIC), playing a role in the activation of eukaryotic genes transcribed by RNA polymerase II. | 0.988 |
drap-1 | tlf-1 | F40F9.7a.1 | F39H11.2b.1 | CBFD_NFYB_HMF domain-containing protein. | TBP-Like Factor. | 0.912 |
drap-1 | ttb-1 | F40F9.7a.1 | W03F9.5.1 | CBFD_NFYB_HMF domain-containing protein. | Transcription initiation factor IIB; General factor that plays a major role in the activation of eukaryotic genes transcribed by RNA polymerase II. | 0.712 |
dro-1 | btf-1 | F53A2.5.1 | F15D4.1.1 | CBFD_NFYB_HMF domain-containing protein. | BTAF (TBP-associated factor) homolog. | 0.892 |
dro-1 | drap-1 | F53A2.5.1 | F40F9.7a.1 | CBFD_NFYB_HMF domain-containing protein. | CBFD_NFYB_HMF domain-containing protein. | 0.997 |
dro-1 | tbp-1 | F53A2.5.1 | T20B12.2.1 | CBFD_NFYB_HMF domain-containing protein. | TATA-box-binding protein; General transcription factor that functions at the core of the DNA-binding multiprotein factor TFIID. Binding of TFIID to the TATA box is the initial transcriptional step of the pre-initiation complex (PIC), playing a role in the activation of eukaryotic genes transcribed by RNA polymerase II. | 0.986 |
dro-1 | tlf-1 | F53A2.5.1 | F39H11.2b.1 | CBFD_NFYB_HMF domain-containing protein. | TBP-Like Factor. | 0.887 |
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