STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pud-1.1PUD1_2 domain-containing protein. (151 aa)    
Predicted Functional Partners:
pud-2.1
Protein Up-regulated in Daf-2(Gf).
    
 
0.966
pud-2.2
Protein Up-regulated in Daf-2(Gf).
    
 
0.912
pud-1.2
Protein Up-regulated in Daf-2(Gf).
    
  
0.800
F13E9.4
DUF148 domain-containing protein.
      
 0.697
irld-32
Recep_L_domain domain-containing protein.
      
 0.696
Y19D10B.6
Uncharacterized protein.
      
 0.691
C32H11.9
CUB_2 domain-containing protein.
      
 0.668
B0035.18
COX6C domain-containing protein.
      
 0.467
R07E4.3
Uncharacterized protein.
      
 0.467
F45H10.2
Uncharacterized protein.
      
 0.465
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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