STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pud-3PUD1_2 domain-containing protein. (172 aa)    
Predicted Functional Partners:
pud-4
PUD1_2 domain-containing protein.
   
  
0.901
bath-26
MATH domain-containing protein.
      
 0.810
C30G12.2
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
  
 0.702
irld-32
Recep_L_domain domain-containing protein.
      
 0.698
Y19D10B.6
Uncharacterized protein.
      
 0.695
cest-1
Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.
   
  
 0.670
F45D11.14
Uncharacterized protein.
   
  
 0.572
F45D11.15
annotation not available
   
  
 0.552
F45D11.16
annotation not available
      
 0.547
Y48G8AL.12
Uncharacterized protein.
      
 0.547
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.