STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ceh-1Homeobox protein ceh-1. (171 aa)    
Predicted Functional Partners:
nhr-273
Nuclear Hormone Receptor family.
      
 0.665
C27F2.1
WD Repeat protein.
      
 0.663
nhr-142
Nuclear Hormone Receptor family.
      
 0.620
nhr-42
Nuclear hormone receptor family member nhr-42; Orphan nuclear receptor; Belongs to the nuclear hormone receptor family.
      
 0.585
tbx-9
T-box transcription factor tbx-9; Involved in the control of early morphogenesis of the intestine, hypodermis and body-wall muscle. Appears to have partially redundant function to tbx-8.
    
 
 0.550
ceh-38
Homeobox protein ceh-38; Probable DNA-binding regulatory protein involved in cell-fate specification.
      
 0.548
ceh-39
Homeobox protein ceh-39; Probable DNA-binding regulatory protein involved in cell-fate specification; Belongs to the CUT homeobox family.
    
 
 0.543
nhr-102
Nuclear Hormone Receptor family.
      
 0.538
lim-4
Putative transcription factor LIM-4.
   
 
 0.500
ceh-32
Homeobox protein ceh-32; Plays a role in head morphogenesis, expression is regulated by vab-3.
      
 0.499
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.