STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F17A2.13Uncharacterized protein. (322 aa)    
Predicted Functional Partners:
btb-6
BTB domain-containing protein.
   
    0.599
skr-7
SKp1 Related (Ubiquitin ligase complex component); Belongs to the SKP1 family.
   
    0.592
skr-14
SKp1 Related (Ubiquitin ligase complex component); Belongs to the SKP1 family.
   
    0.592
K04G2.10
Uncharacterized protein.
   
    0.546
nhr-2
Nuclear hormone receptor family member nhr-2; Orphan nuclear receptor; Belongs to the nuclear hormone receptor family.
   
    0.542
fkh-4
Fork-head domain-containing protein.
   
    0.538
vet-2
Very Early Transcript.
   
    0.538
T25E12.6
FTH domain-containing protein.
   
    0.538
athp-3
PHD domain-containing protein.
   
    0.537
F56D5.5
Uncharacterized protein.
   
    0.528
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.