STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F17A9.2CWF19-like protein 1 homolog; Belongs to the CWF19 family. (533 aa)    
Predicted Functional Partners:
cdc-5L
Cell Division Cycle related.
   
 
 0.941
dbr-1
Lariat debranching enzyme; Cleaves the 2'-5' phosphodiester linkage at the branch point of lariat intron pre-mRNAs after splicing and converts them into linear molecules that are subsequently degraded. It thereby facilitates ribonucleotide turnover. It may also participate in retrovirus replication via an RNA lariat intermediate in cDNA synthesis (By similarity); Belongs to the lariat debranching enzyme family.
   
 
 0.769
F41G3.6
Uncharacterized protein.
   
  
 0.760
ZK1067.3
Uncharacterized protein.
   
  
 0.751
C39E9.12
SAP domain-containing protein.
   
  
 0.746
B0361.2
CWF19-like protein 2 homolog; Belongs to the CWF19 family.
   
 0.736
K05C4.7
Armadillo repeat-containing protein 1.
   
  
 0.732
C01G10.7
HpcH_HpaI domain-containing protein.
   
  
 0.722
C18E3.9
Uncharacterized protein.
   
  
 0.722
C28A5.1
Uncharacterized protein.
   
  
 0.722
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
Server load: low (36%) [HD]