STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rgba-1Regulatory Gene for Behavioral Aging. (106 aa)    
Predicted Functional Partners:
npr-28
G_PROTEIN_RECEP_F1_2 domain-containing protein.
      
 0.884
F59C6.18
Uncharacterized protein.
      
 0.850
nlp-39
Neuropeptide-Like Protein.
      
 0.809
nlp-4
Neuropeptide-Like Protein.
      
 0.805
snet-1
Protein snet-1; Negatively regulates chemotaxis and olfactory plasticity which is the change from positive chemotaxis to dispersal after prolonged exposure to an odorant. May be down-regulated in response to pheromone exposure, resulting in promotion of olfactory plasticity.
      
 0.692
nlp-55
Neuropeptide-Like Protein.
      
 0.660
nlp-60
Neuropeptide-Like Protein.
      
 0.615
nlp-79
Neuropeptide-Like Protein.
      
 0.614
nlp-56
Neuropeptide-Like Protein.
      
 0.614
K02A6.1
Uncharacterized protein.
   
  
 0.587
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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